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Influenza Virus Structure

*Influenzavirus*

For medical students2 min readUpdated 2026-10-10

The influenza virus is an RNA-containing enveloped virus characterized by marked polymorphism and a complex structural organization. Its key evolutionary feature lies in a segmented genome and the presence of specific surface glycoproteins that mediate infection of susceptible respiratory tract cells and the subsequent spread of new virions within the host organism.

Virion sizeSpherical particles have a diameter ranging from 80 to 120 nm.
GenomeSingle-stranded negative-sense RNA divided into 7 or 8 segments.
EnvelopeThe viral envelope (supercapsid) is derived from the host cell lipid membrane.

General Morphology and Outer Envelope

A mature virion (Influenzavirus) typically has a regular spherical shape with a diameter ranging from 80 to 120 nm. However, the virus exhibits marked polymorphism: examination of fresh clinical specimens often reveals long filamentous forms.

The outer layer of the virus is represented by the envelope (supercapsid), a lipoprotein membrane of exclusively cellular origin. During budding from the infected cell, the virus acquires a patch of the host cytoplasmic membrane. This lipid envelope renders influenza viruses highly sensitive to ether and other lipid solvents. Integrated into this membrane are ion channels formed by the specific viral M2 protein.

Surface Glycoproteins: Envelope Spikes

Characteristic spikes about 10 nm in length project from the surface of the envelope. They are formed by two key virus-specific glycoproteins: hemagglutinin (HA) and neuraminidase (NA). These proteins are encoded by the viral genome, synthesized in the host cell, integrated into its membrane, and incorporated into the virion during assembly.

The number of hemagglutinin molecules on the virion surface is approximately 5 times greater than the number of neuraminidase molecules. Purified forms of these antigens are of paramount practical importance: they are utilized by biotechnologists to create modern, effective subunit vaccines.

Characteristics of Hemagglutinin (HA)

Characteristics of Neuraminidase (NA)

Internal Structures: Matrix and Nucleocapsid

Directly beneath the lipid envelope lies a dense layer of matrix protein M1. It lines the inner surface of the envelope, providing the virion with structural rigidity and regular shape. The M1 protein performs an important regulatory function: upon reaching high accumulation levels in an infected cell, it induces the export of synthesized genome segments from the nucleus to the cytoplasm. This process is mediated by a specialized nuclear export protein (NEP).

Beneath the matrix layer lies the viral core — the nucleocapsid, which possesses helical symmetry. Its components include:

Mnemonic

To remember the functions of the surface proteins, use the first-letter rule: Hemagglutinin (HA) — Hauls the virus into the cell (mediates attachment). Neuraminidase (NA) — Nibs/Nips the bonds to release (prevents clumping of mature virions upon exit).

Frequently asked questions

What function does the ion channel formed by the M2 protein perform in the replication cycle?

The M2 ion channel allows hydrogen ions to flow into the viral particle, which is necessary for uncoating (deproteinization). Acidification of the virion interior causes dissociation of the ribonucleoproteins from the matrix protein. As a result, the viral RNA is released from the capsid and enters the cytoplasm for subsequent transport to the nucleus.

Which specific molecules on the surface of respiratory tract cells does hemagglutinin bind to?

Hemagglutinin binds to specific receptors containing sialic acid residues. On the respiratory epithelium, these molecules include:

  • α-2',6'-linked galactose-containing oligosaccharides — the primary receptors for viral attachment to upper respiratory tract mucosal cells.
  • α-2',3'-linked receptors — specific molecules on the epithelium of bronchioles and alveoli, to which the pandemic A(pH1N1) strain has acquired binding affinity.

These sialic acids are components of cellular glycoproteins and glycolipids.

What types of antigenic variation are characteristic of the influenza virus?

Type A influenza viruses exhibit two main types of antigenic variation affecting their surface antigens — hemagglutinin (HA/H) and neuraminidase (NA/N).

  • Antigenic drift — minor structural changes in surface antigens resulting from point mutations in the genes encoding HA and NA antigenic determinants. It occurs frequently and continuously, leading to new serovariants and causing periodic epidemics.
  • Antigenic shift (reassortment) — major, radical alterations in surface antigen structure, up to the complete replacement of HA or NA. It occurs via RNA segment exchange when two different viral subtypes coinfect the same cell. It happens infrequently and is responsible for pandemics.
Why does the influenza virus have such high variability?

The viral genome is not a single continuous molecule, but consists of 7 or 8 separate negative-sense RNA segments. This fragmented structure strongly predisposes the virus to genetic recombination: if two different strains infect the same cell, they can exchange entire segments, generating a fundamentally new viral subtype.

Where does the outer lipid envelope of the influenza virus come from?

The outer envelope (supercapsid) is not synthesized by the virus de novo. It is of cellular origin: as the assembled virion buds from the host cell, it captures (acquires) a patch of the host cell's lipid membrane.

Which influenza virus components are used in the production of modern vaccines?

Safe subunit vaccines utilize purified surface glycoproteins — hemagglutinin (HA) and neuraminidase (NA). These proteins elicit a robust and reliable protective immune response.

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