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Molecular and Synthetic Vaccines

For medical students3 min readUpdated 2026-10-10

Molecular vaccines are preparations in which the antigen is represented not by a whole microorganism, but by its specific fragments (epitopes). To enhance the immune response, these isolated antigens are combined with polymeric carriers, creating highly effective synthetic vaccines.

Antigen sourcesBiological or chemical synthesis, as well as genetic engineering
Toxoid productionExposure to 0.4% formaldehyde and 37 °C for 3–4 weeks
Polymeric carrierFunctions as a carrier enlarging the antigen and simultaneously acts as an adjuvant
Multicomponent natureAssociated vaccines protect against multiple infections simultaneously without overloading the immune system

Methods of Obtaining Molecular Vaccines

Molecular vaccines are based on the use of purified antigens—molecules or small regions of them that are recognized by our immune system. Because the preparation contains no whole pathogens, such vaccines are considered extremely safe and precisely targeted.

There are three main methods for obtaining the required protective antigen:

Toxoids as a Classical Example

An important group of molecular vaccines is toxoids. They induce immunity not against the microbe itself, but against the toxin it produces. Mass immunization with diphtheria and tetanus toxoids has dramatically reduced incidence rates and eliminated epidemics. Preparations against botulism, gas gangrene (caused by Cl. perfringens and Cl. novyi), cholera, and staphylococcal infections also exist.

Their production technology is strictly regulated and includes several stages:

  1. Cultivation: large-scale cultivation of bacteria for exotoxin production.
  2. Inactivation: the exotoxin is treated with a 0.4% formaldehyde solution and kept warm (37 °C) for 3–4 weeks. The molecule completely loses its toxicity while retaining its specific antigenicity.
  3. Purification and concentration: removal of microbial metabolic byproduct waste and residual nutrient media.
  4. Sorption (adjuvant addition): to enhance immunogenicity, sorbents (aluminum hydroxide gel or aluminum phosphate) are added to the preparation.

Finished toxoids are administered subcutaneously or intramuscularly. Their dosage is measured in specific units: IU (antitoxin binding units) or Lf (flocculation units).

Synthetic Vaccines: Solving Low Immunogenicity

The main problem with isolated molecules (or epitopes) is their extremely low immunogenicity. Upon entering the body, they fail to elicit a full-fledged immune response for two reasons:

To transform a weak molecular stimulus into a strong synthetic vaccine, researchers artificially enlarge the antigen. For this purpose, the antigenic determinant is chemically or physico-chemically "conjugated" to a high-molecular-weight carrier—a safe polymer (e.g., polyvinylpyrrolidone). In such a design, the polymer performs dual functions: it works as a transporter ("schlapper") and as an adjuvant.

This modification provides powerful immunological advantages:

Note: Development of such polymer-based influenza vaccines has been pioneered by modern immunopharmacology schools utilizing soluble macromolecular carriers.

Associated (Multicomponent) Vaccines

To optimize immunization schedules, reduce the number of injections, and minimize physician visits during mass prophylaxis, associated vaccines are created. These are preparations that include several different antigens simultaneously (including live or inactivated components). The human immune system is physiologically capable of responding to dozens of antigens at once without overload; however, the primary technological challenge is achieving an ideal compositional balance to eliminate antigenic competition and excessive reactions.

Depending on the nature of the constituent antigens, two types of such vaccines are distinguished:

Mnemonic

To remember the composition of the classical DTaP combination vaccine, break down its components: Diphtheria toxoid, Tetanus toxoid, and Pertussis (whole-cell or acellular). Keep in mind that diphtheria and tetanus are represented by toxoids.

Frequently asked questions

What are the absolute contraindications to administering a combination DTP/DTaP vaccine?

Contraindications include progressive neurological disorders and afebrile seizures of unknown origin, as vaccination may increase the risk of provoking seizure activity.

How does a toxoid fundamentally differ from an exotoxin?

A toxoid is derived from an exotoxin through prolonged exposure to formaldehyde (0.4%) and temperature (37 °C). It is completely devoid of toxic properties but retains the ability to stimulate the production of specific protective antibodies.

Why do pure molecular antigens have weak immunogenicity?

They have too low a molecular weight and are rapidly subjected to enzymatic degradation in the body. Consequently, immunocompetent cells cannot bind to them effectively to trigger the immune response cascade.

What are associated vaccines and why are they used?

These are preparations containing multiple different antigens in a single dose. They are used for convenience and to optimize immunization schedules, protecting a person against several infections with a single injection.

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