Types of Virus-Host Cell Interactions
The outcome of an infection at the cellular level can vary. Classification is based on the final result:
- Productive infection. The infection culminates in the assembly and release of new virions. If the cell dies in the process, it is termed a cytocidal effect (characteristic of non-enveloped viruses). If the virus buds off and the cell survives, it is a non-cytocidal effect (enveloped viruses).
- Abortive infection. The life cycle is interrupted at one of the stages, and no new viral particles are formed.
- Integrative infection (virogeny). The viral genetic material integrates into the host cell chromosome. This forms a provirus, which is replicated along with the host DNA during cell division.
- Plasmid-like infection. Circular viral nucleic acids exist autonomously in the cytoplasm, similar to bacterial plasmids.
Stages of the Replication Cycle
The replication process proceeds in five sequential steps:
- Attachment (Adsorption). The virion attaches to the cell. Non-specific ionic attraction acts first, followed by highly specific binding of viral ligands to specific cellular receptors (their density can reach 10,000–100,000 per cell).
- Penetration and Uncoating (Deproteinization). The virus enters the cell. Non-enveloped viruses use viropexis (receptor-mediated endocytosis) or form a pore in the membrane. Enveloped viruses fuse with the plasma membrane or endosomal membrane using specialized fusion proteins. The virus then sheds its protein coats, releasing its nucleic acid (or nucleocapsid/core).
- Synthesis. A disjunctive mode of replication takes place: viral components are synthesized in different parts of the cell, uncoupled in time and space.
- Assembly. New genomes and structural components (capsid, envelope proteins, and genomic elements) aggregate into mature virions.
- Release. The new generation of viruses exits the cell.
Protein and Nucleic Acid Synthesis
Viruses force the cell to synthesize two groups of proteins: non-structural (replication and transcription enzymes, regulatory proteins) and structural (components of the virion itself). The key difference among viral groups lies in how they obtain messenger RNA (mRNA) necessary for protein translation:
- DNA viruses. The classical pathway: DNA $\rightarrow$ mRNA $\rightarrow$ protein. Most replicate in the nucleus using host polymerases (an exception is poxviruses, which use their own enzymes in the cytoplasm).
- Positive-sense single-stranded RNA (+ssRNA) viruses. The genomic RNA serves directly as mRNA. Transcription is not required; translation proceeds immediately: +ssRNA $\rightarrow$ protein.
- Negative-sense single-stranded RNA (-ssRNA) viruses. Their RNA is not recognized by ribosomes. First, mRNA is synthesized using a virally encoded RNA-dependent RNA polymerase: -ssRNA $\rightarrow$ mRNA $\rightarrow$ protein.
- Retroviruses. Possess a diploid genome and the enzyme reverse transcriptase. The pathway: RNA $\rightarrow$ cDNA (single-stranded) $\rightarrow$ double-stranded DNA $\rightarrow$ integration into host genome $\rightarrow$ mRNA $\rightarrow$ protein.